IL_5UYQ_193
3D structure
- PDB id
- 5UYQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC
- Length
- 33 nucleotides
- Bulged bases
- 5UYQ|1|01|U|2132, 5UYQ|1|01|U|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5UYQ|1|01|G|2124
5UYQ|1|01|G|2125
5UYQ|1|01|A|2126
5UYQ|1|01|G|2127
5UYQ|1|01|G|2128
5UYQ|1|01|C|2129
5UYQ|1|01|U|2130
5UYQ|1|01|U|2131
5UYQ|1|01|U|2132
5UYQ|1|01|G|2133
5UYQ|1|01|A|2134
5UYQ|1|01|A|2135
5UYQ|1|01|G|2136
*
5UYQ|1|01|U|2155
5UYQ|1|01|G|2156
5UYQ|1|01|G|2157
5UYQ|1|01|A|2158
5UYQ|1|01|G|2159
5UYQ|1|01|C|2160
5UYQ|1|01|C|2161
5UYQ|1|01|G|2162
5UYQ|1|01|A|2163
5UYQ|1|01|C|2164
5UYQ|1|01|C|2165
5UYQ|1|01|U|2166
5UYQ|1|01|U|2167
5UYQ|1|01|G|2168
5UYQ|1|01|A|2169
5UYQ|1|01|A|2170
5UYQ|1|01|A|2171
5UYQ|1|01|U|2172
5UYQ|1|01|A|2173
5UYQ|1|01|C|2174
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 03
- 50S ribosomal protein L1
- Chain X
- Transfer RNA; tRNA
Coloring options: