IL_5V93_019

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCGAAGCG*CGUGAUAGCUG

Length

19 nucleotides

Bulged bases

5V93|1|A|G|930, 5V93|1|A|G|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|801
5V93|1|A|C|802
5V93|1|A|G|803
5V93|1|A|A|804
5V93|1|A|A|805
5V93|1|A|G|806
5V93|1|A|C|807
5V93|1|A|G|808
*
5V93|1|A|C|927
5V93|1|A|G|928
5V93|1|A|U|929
5V93|1|A|G|930
5V93|1|A|A|931
5V93|1|A|U|932
5V93|1|A|A|933
5V93|1|A|G|934
5V93|1|A|C|935
5V93|1|A|U|936
5V93|1|A|G|937

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15