IL_5V93_027

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAGGUAGA*UCCGAAUGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|G|985
5V93|1|A|A|986
5V93|1|A|G|987
5V93|1|A|G|988
5V93|1|A|U|989
5V93|1|A|A|990
5V93|1|A|G|991
5V93|1|A|A|992
*
5V93|1|A|U|1042
5V93|1|A|C|1043
5V93|1|A|C|1044
5V93|1|A|G|1045
5V93|1|A|A|1046
5V93|1|A|A|1047
5V93|1|A|U|1048
5V93|1|A|G|1049
5V93|1|A|C|1050

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27

Chain Z

50S ribosomal protein L30