IL_5V93_041

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUCAGCGAAGC*GUGGAGGG

Length

19 nucleotides

Bulged bases

5V93|1|A|C|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|U|1337
5V93|1|A|U|1338
5V93|1|A|C|1339
5V93|1|A|A|1340
5V93|1|A|G|1341
5V93|1|A|C|1342
5V93|1|A|G|1343
5V93|1|A|A|1344
5V93|1|A|A|1345
5V93|1|A|G|1346
5V93|1|A|C|1347
*
5V93|1|A|G|1364
5V93|1|A|U|1365
5V93|1|A|G|1366
5V93|1|A|G|1367
5V93|1|A|A|1368
5V93|1|A|G|1369
5V93|1|A|G|1370
5V93|1|A|G|1371

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20