IL_5V93_066

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGCUG*CAGUAAA

Length

12 nucleotides

Bulged bases

5V93|1|A|A|2137, 5V93|1|A|A|2138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|U|2075
5V93|1|A|G|2076
5V93|1|A|C|2077
5V93|1|A|U|2078
5V93|1|A|G|2079
*
5V93|1|A|C|2133
5V93|1|A|A|2134
5V93|1|A|G|2135
5V93|1|A|U|2136
5V93|1|A|A|2137
5V93|1|A|A|2138
5V93|1|A|A|2139

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA