IL_5V93_076

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UACAAC*GCGGGUA

Length

13 nucleotides

Bulged bases

5V93|1|A|G|2476

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|U|2316
5V93|1|A|A|2317
5V93|1|A|C|2318
5V93|1|A|A|2319
5V93|1|A|A|2320
5V93|1|A|C|2321
*
5V93|1|A|G|2473
5V93|1|A|C|2474
5V93|1|A|G|2475
5V93|1|A|G|2476
5V93|1|A|G|2477
5V93|1|A|U|2478
5V93|1|A|A|2479

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L28