IL_5V93_089

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUCGU*GCACGCGAG

Length

14 nucleotides

Bulged bases

5V93|1|A|A|2810, 5V93|1|A|C|2811, 5V93|1|A|G|2814, 5V93|1|A|A|2815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|2748
5V93|1|A|U|2749
5V93|1|A|C|2750
5V93|1|A|G|2751
5V93|1|A|U|2752
*
5V93|1|A|G|2808
5V93|1|A|C|2809
5V93|1|A|A|2810
5V93|1|A|C|2811
5V93|1|A|G|2812
5V93|1|A|C|2813
5V93|1|A|G|2814
5V93|1|A|A|2815
5V93|1|A|G|2816

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13