IL_5V93_121

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CACAAUGG*CUGAUG

Length

14 nucleotides

Bulged bases

5V93|1|a|G|387

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|a|C|369
5V93|1|a|A|370
5V93|1|a|C|371
5V93|1|a|A|372
5V93|1|a|A|373
5V93|1|a|U|374
5V93|1|a|G|375
5V93|1|a|G|376
*
5V93|1|a|C|385
5V93|1|a|U|386
5V93|1|a|G|387
5V93|1|a|A|388
5V93|1|a|U|389
5V93|1|a|G|390

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16