IL_5V93_124

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGACGAAG*UUGACGGUAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|a|C|445
5V93|1|a|G|446
5V93|1|a|A|447
5V93|1|a|C|448
5V93|1|a|G|449
5V93|1|a|A|450
5V93|1|a|A|451
5V93|1|a|G|452
*
5V93|1|a|U|470
5V93|1|a|U|471
5V93|1|a|G|472
5V93|1|a|A|473
5V93|1|a|C|474
5V93|1|a|G|475
5V93|1|a|G|476
5V93|1|a|U|477
5V93|1|a|A|478
5V93|1|a|G|479

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16