IL_5V93_146
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AUUAAUUCGAUGCAACGCGAAGAACCUUAC*GGCUU
- Length
- 35 nucleotides
- Bulged bases
- 5V93|1|a|G|964, 5V93|1|a|A|968, 5V93|1|a|G|969, 5V93|1|a|A|971
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V93|1|a|A|948
5V93|1|a|U|949
5V93|1|a|U|950
5V93|1|a|A|951
5V93|1|a|A|952
5V93|1|a|U|953
5V93|1|a|U|954
5V93|1|a|C|955
5V93|1|a|G|956
5V93|1|a|A|957
5V93|1|a|U|958
5V93|1|a|G|959
5V93|1|a|C|960
5V93|1|a|A|961
5V93|1|a|A|962
5V93|1|a|C|963
5V93|1|a|G|964
5V93|1|a|C|965
5V93|1|a|G|966
5V93|1|a|A|967
5V93|1|a|A|968
5V93|1|a|G|969
5V93|1|a|A|970
5V93|1|a|A|971
5V93|1|a|C|972
5V93|1|a|C|973
5V93|1|a|U|974
5V93|1|a|U|975
5V93|1|a|A|976
5V93|1|a|C|977
*
5V93|1|a|G|1213
5V93|1|a|G|1214
5V93|1|a|C|1215
5V93|1|a|U|1216
5V93|1|a|U|1217
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14 type Z
- Chain s
- 30S ribosomal protein S19
Coloring options: