IL_5V93_189

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AGGAA*UCUGCU

Length

11 nucleotides

Bulged bases

5V93|1|A|U|1796

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|A|1669
5V93|1|A|G|1670
5V93|1|A|G|1671
5V93|1|A|A|1672
5V93|1|A|A|1673
*
5V93|1|A|U|1794
5V93|1|A|C|1795
5V93|1|A|U|1796
5V93|1|A|G|1797
5V93|1|A|C|1798
5V93|1|A|U|1799

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2