IL_5VPO_044

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

AGUUGCCAGC*GGGCACUCU

Length

19 nucleotides

Bulged bases

5VPO|1|QA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|QA|A|1123
5VPO|1|QA|G|1124
5VPO|1|QA|U|1125
5VPO|1|QA|U|1126
5VPO|1|QA|G|1127
5VPO|1|QA|C|1128
5VPO|1|QA|C|1129
5VPO|1|QA|A|1130
5VPO|1|QA|G|1131
5VPO|1|QA|C|1132
*
5VPO|1|QA|G|1142
5VPO|1|QA|G|1143
5VPO|1|QA|G|1144
5VPO|1|QA|C|1145
5VPO|1|QA|A|1146
5VPO|1|QA|C|1147
5VPO|1|QA|U|1148
5VPO|1|QA|C|1149
5VPO|1|QA|U|1150

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10