IL_5VPO_099

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

GCGAAGACAGC*GUCGAGU

Length

18 nucleotides

Bulged bases

5VPO|1|RA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|RA|G|1042
5VPO|1|RA|C|1043
5VPO|1|RA|G|1044
5VPO|1|RA|A|1045
5VPO|1|RA|A|1046
5VPO|1|RA|G|1047
5VPO|1|RA|A|1048
5VPO|1|RA|C|1049
5VPO|1|RA|A|1050
5VPO|1|RA|G|1051
5VPO|1|RA|C|1052
*
5VPO|1|RA|G|1107
5VPO|1|RA|U|1108
5VPO|1|RA|C|1109
5VPO|1|RA|G|1110
5VPO|1|RA|A|1111
5VPO|1|RA|G|1112
5VPO|1|RA|U|1113

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RH

50S ribosomal protein L6