IL_5VPO_143

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

5VPO|1|RA|U|2167, 5VPO|1|RA|A|2169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|RA|G|2124
5VPO|1|RA|G|2125
5VPO|1|RA|A|2126
5VPO|1|RA|G|2127
*
5VPO|1|RA|C|2161
5VPO|1|RA|G|2162
5VPO|1|RA|C|2163
5VPO|1|RA|C|2164
5VPO|1|RA|G|2165
5VPO|1|RA|G|2166
5VPO|1|RA|U|2167
5VPO|1|RA|G|2168
5VPO|1|RA|A|2169
5VPO|1|RA|A|2170
5VPO|1|RA|A|2171
5VPO|1|RA|U|2172
5VPO|1|RA|A|2173
5VPO|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains