3D structure

PDB id
5VPO (explore in PDB, NAKB, or RNA 3D Hub)
Description
The 70S P-site ASL SufA6 complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.34 Å

Loop

Sequence
CCUGUGAAC*GGGAGG
Length
15 nucleotides
Bulged bases
5VPO|1|RA|U|2132
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5VPO|1|RA|C|2128
5VPO|1|RA|C|2129
5VPO|1|RA|U|2130
5VPO|1|RA|G|2131
5VPO|1|RA|U|2132
5VPO|1|RA|G|2133
5VPO|1|RA|A|2134
5VPO|1|RA|A|2135
5VPO|1|RA|C|2136
*
5VPO|1|RA|G|2155
5VPO|1|RA|G|2156
5VPO|1|RA|G|2157
5VPO|1|RA|A|2158
5VPO|1|RA|G|2159
5VPO|1|RA|G|2160

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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