IL_5VPO_346
3D structure
- PDB id
- 5VPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site ASL SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.34 Å
Loop
- Sequence
- CCC*GUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5VPO_346 not in the Motif Atlas
- Homologous match to IL_4LFB_010
- Geometric discrepancy: 0.0738
- The information below is about IL_4LFB_010
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
5VPO|1|QA|C|186
5VPO|1|QA|C|186|||A
5VPO|1|QA|C|186|||B
*
5VPO|1|QA|G|191|||E
5VPO|1|QA|U|191|||F
5VPO|1|QA|G|191
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QT
- 30S ribosomal protein S20
Coloring options: