IL_5VPO_354

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

UGCGAUG*CUAAGCACAA

Length

17 nucleotides

Bulged bases

5VPO|1|RA|U|1420, 5VPO|1|RA|C|1585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|RA|U|1415
5VPO|1|RA|G|1416
5VPO|1|RA|C|1417
5VPO|1|RA|G|1418
5VPO|1|RA|A|1419
5VPO|1|RA|U|1420
5VPO|1|RA|G|1421
*
5VPO|1|RA|C|1577
5VPO|1|RA|U|1578
5VPO|1|RA|A|1579
5VPO|1|RA|A|1580
5VPO|1|RA|G|1581
5VPO|1|RA|C|1582
5VPO|1|RA|A|1583
5VPO|1|RA|C|1585
5VPO|1|RA|A|1586
5VPO|1|RA|A|1587

Current chains

Chain RA

23S rRNA

Nearby chains