IL_5VPP_044

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GGC*GUCAGC

Length

9 nucleotides

Bulged bases

5VPP|1|QA|C|1200, 5VPP|1|QA|A|1201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|QA|G|1057
5VPP|1|QA|G|1058
5VPP|1|QA|C|1059
*
5VPP|1|QA|G|1198
5VPP|1|QA|U|1199
5VPP|1|QA|C|1200
5VPP|1|QA|A|1201
5VPP|1|QA|G|1202
5VPP|1|QA|C|1203

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z