IL_5VPP_223

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|XA|C|1246
5VPP|1|XA|U|1247
5VPP|1|XA|A|1248
5VPP|1|XA|C|1249
5VPP|1|XA|A|1250
5VPP|1|XA|A|1251
5VPP|1|XA|A|1252
5VPP|1|XA|G|1253
*
5VPP|1|XA|C|1284
5VPP|1|XA|A|1285
5VPP|1|XA|A|1286
5VPP|1|XA|A|1287
5VPP|1|XA|A|1288
5VPP|1|XA|A|1289
5VPP|1|XA|G|1290
5VPP|1|XA|G|1291

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10

Chain XN

30S ribosomal protein S14 type Z