IL_5VPP_323
3D structure
- PDB id
- 5VPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site tRNA SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAGC*GCGCCGGUGAAAUAC
- Length
- 20 nucleotides
- Bulged bases
- 5VPP|1|YA|U|2167
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VPP|1|YA|G|2124
5VPP|1|YA|G|2125
5VPP|1|YA|A|2126
5VPP|1|YA|G|2127
5VPP|1|YA|C|2128
*
5VPP|1|YA|G|2160
5VPP|1|YA|C|2161
5VPP|1|YA|G|2162
5VPP|1|YA|C|2163
5VPP|1|YA|C|2164
5VPP|1|YA|G|2165
5VPP|1|YA|G|2166
5VPP|1|YA|U|2167
5VPP|1|YA|G|2168
5VPP|1|YA|A|2169
5VPP|1|YA|A|2170
5VPP|1|YA|A|2171
5VPP|1|YA|U|2172
5VPP|1|YA|A|2173
5VPP|1|YA|C|2174
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XV
- Transfer RNA; tRNA
Coloring options: