IL_5VPP_370

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GGGACG*CGGUACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|XA|G|445
5VPP|1|XA|G|446
5VPP|1|XA|G|447
5VPP|1|XA|A|448
5VPP|1|XA|C|449
5VPP|1|XA|G|450
*
5VPP|1|XA|C|483
5VPP|1|XA|G|484
5VPP|1|XA|G|485
5VPP|1|XA|U|486
5VPP|1|XA|A|487
5VPP|1|XA|C|488
5VPP|1|XA|C|489

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XD

30S ribosomal protein S4

Chain XP

30S ribosomal protein S16