IL_5VPP_380
3D structure
- PDB id
- 5VPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site tRNA SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- CACGGCGUCAAGCCGGUAAG*CGAGG
- Length
- 25 nucleotides
- Bulged bases
- 5VPP|1|YA|A|2790, 5VPP|1|YA|U|2797
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VPP|1|YA|C|2789
5VPP|1|YA|A|2790
5VPP|1|YA|C|2791
5VPP|1|YA|G|2792
5VPP|1|YA|G|2793
5VPP|1|YA|C|2794
5VPP|1|YA|G|2795
5VPP|1|YA|U|2797
5VPP|1|YA|C|2798
5VPP|1|YA|A|2799
5VPP|1|YA|A|2801
5VPP|1|YA|G|2802
5VPP|1|YA|C|2803
5VPP|1|YA|C|2804
5VPP|1|YA|G|2805
5VPP|1|YA|G|2807
5VPP|1|YA|U|2808
5VPP|1|YA|A|2809
5VPP|1|YA|A|2810
5VPP|1|YA|G|2811
*
5VPP|1|YA|C|2889
5VPP|1|YA|G|2891
5VPP|1|YA|A|2892
5VPP|1|YA|G|2893
5VPP|1|YA|G|2894
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YE
- 50S ribosomal protein L3
- Chain YW
- 50S ribosomal protein L22
Coloring options: