IL_5WDT_037

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCCAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

5WDT|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|G|1042
5WDT|1|A|C|1043
5WDT|1|A|C|1044
5WDT|1|A|C|1045
5WDT|1|A|A|1046
5WDT|1|A|G|1047
5WDT|1|A|A|1048
5WDT|1|A|C|1049
5WDT|1|A|A|1050
5WDT|1|A|G|1051
*
5WDT|1|A|U|1108
5WDT|1|A|C|1109
5WDT|1|A|G|1110
5WDT|1|A|A|1111
5WDT|1|A|G|1112
5WDT|1|A|U|1113

Current chains

Chain A

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L10

Chain G

50S ribosomal protein L6