IL_5WDT_038
3D structure
- PDB id
- 5WDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC
- Length
- 36 nucleotides
- Bulged bases
- 5WDT|1|A|U|1061, 5WDT|1|A|U|1066, 5WDT|1|A|A|1070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WDT|1|A|G|1055
5WDT|1|A|G|1056
5WDT|1|A|A|1057
5WDT|1|A|U|1058
5WDT|1|A|G|1059
5WDT|1|A|U|1060
5WDT|1|A|U|1061
5WDT|1|A|G|1062
5WDT|1|A|G|1063
5WDT|1|A|C|1064
5WDT|1|A|U|1065
5WDT|1|A|U|1066
5WDT|1|A|A|1067
5WDT|1|A|G|1068
5WDT|1|A|A|1069
5WDT|1|A|A|1070
5WDT|1|A|G|1071
5WDT|1|A|C|1072
5WDT|1|A|A|1073
5WDT|1|A|G|1074
5WDT|1|A|C|1075
5WDT|1|A|C|1076
5WDT|1|A|A|1077
5WDT|1|A|U|1078
5WDT|1|A|C|1079
5WDT|1|A|A|1080
5WDT|1|A|U|1081
5WDT|1|A|U|1082
5WDT|1|A|U|1083
5WDT|1|A|A|1084
5WDT|1|A|A|1085
5WDT|1|A|A|1086
5WDT|1|A|G|1087
*
5WDT|1|A|C|1102
5WDT|1|A|A|1103
5WDT|1|A|C|1104
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain 5
- 50S ribosomal protein L10
- Chain I
- 50S ribosomal protein L11
- Chain M
- 50S ribosomal protein L16
- Chain y
- Transfer RNA; tRNA
Coloring options: