IL_5WDT_079

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

5WDT|1|A|U|2111, 5WDT|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|U|2105
5WDT|1|A|U|2106
5WDT|1|A|G|2107
5WDT|1|A|A|2108
5WDT|1|A|U|2109
5WDT|1|A|G|2110
5WDT|1|A|U|2111
5WDT|1|A|G|2112
5WDT|1|A|U|2113
5WDT|1|A|A|2114
5WDT|1|A|G|2115
5WDT|1|A|G|2116
5WDT|1|A|A|2117
5WDT|1|A|U|2118
5WDT|1|A|A|2119
5WDT|1|A|G|2120
5WDT|1|A|G|2121
*
5WDT|1|A|C|2177
5WDT|1|A|C|2178
5WDT|1|A|C|2179
5WDT|1|A|U|2180
5WDT|1|A|U|2181
5WDT|1|A|U|2182
5WDT|1|A|A|2183
5WDT|1|A|A|2184

Current chains

Chain A

23S rRNA

Nearby chains

Chain k

30S ribosomal protein S11

Chain w

Transfer RNA; tRNA