IL_5WDT_080

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGGGAGG*CCGACCUUGAAAUACCAC

Length

26 nucleotides

Bulged bases

5WDT|1|A|A|2171, 5WDT|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|G|2121
5WDT|1|A|U|2122
5WDT|1|A|G|2123
5WDT|1|A|G|2124
5WDT|1|A|G|2125
5WDT|1|A|A|2126
5WDT|1|A|G|2127
5WDT|1|A|G|2128
*
5WDT|1|A|C|2160
5WDT|1|A|C|2161
5WDT|1|A|G|2162
5WDT|1|A|A|2163
5WDT|1|A|C|2164
5WDT|1|A|C|2165
5WDT|1|A|U|2166
5WDT|1|A|U|2167
5WDT|1|A|G|2168
5WDT|1|A|A|2169
5WDT|1|A|A|2170
5WDT|1|A|A|2171
5WDT|1|A|U|2172
5WDT|1|A|A|2173
5WDT|1|A|C|2174
5WDT|1|A|C|2175
5WDT|1|A|A|2176
5WDT|1|A|C|2177

Current chains

Chain A

23S rRNA

Nearby chains

Chain w

Transfer RNA; tRNA