IL_5WDT_081

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCUUUGAAGUG*CAUGGAGC

Length

19 nucleotides

Bulged bases

5WDT|1|A|U|2132, 5WDT|1|A|G|2133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|G|2128
5WDT|1|A|C|2129
5WDT|1|A|U|2130
5WDT|1|A|U|2131
5WDT|1|A|U|2132
5WDT|1|A|G|2133
5WDT|1|A|A|2134
5WDT|1|A|A|2135
5WDT|1|A|G|2136
5WDT|1|A|U|2137
5WDT|1|A|G|2138
*
5WDT|1|A|C|2153
5WDT|1|A|A|2154
5WDT|1|A|U|2155
5WDT|1|A|G|2156
5WDT|1|A|G|2157
5WDT|1|A|A|2158
5WDT|1|A|G|2159
5WDT|1|A|C|2160

Current chains

Chain A

23S rRNA

Nearby chains