IL_5WDT_121

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

5WDT|1|a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|a|G|147
5WDT|1|a|G|148
5WDT|1|a|A|149
5WDT|1|a|U|150
5WDT|1|a|A|151
5WDT|1|a|A|152
5WDT|1|a|C|153
5WDT|1|a|U|154
*
5WDT|1|a|A|167
5WDT|1|a|G|168
5WDT|1|a|C|169
5WDT|1|a|U|170
5WDT|1|a|A|171
5WDT|1|a|A|172
5WDT|1|a|U|173
5WDT|1|a|A|174
5WDT|1|a|C|175

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20