IL_5WDT_127
3D structure
- PDB id
- 5WDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WDT_127 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1353
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
5WDT|1|a|U|409
5WDT|1|a|G|410
5WDT|1|a|A|411
5WDT|1|a|A|412
5WDT|1|a|G|413
5WDT|1|a|A|414
5WDT|1|a|A|415
5WDT|1|a|G|416
*
5WDT|1|a|U|427
5WDT|1|a|G|428
5WDT|1|a|U|429
5WDT|1|a|A|430
5WDT|1|a|A|431
5WDT|1|a|A|432
5WDT|1|a|G|433
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
Coloring options: