IL_5WDT_161

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

5WDT|1|a|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|a|A|1246
5WDT|1|a|U|1247
5WDT|1|a|A|1248
5WDT|1|a|C|1249
5WDT|1|a|A|1250
5WDT|1|a|A|1251
5WDT|1|a|A|1252
5WDT|1|a|G|1253
*
5WDT|1|a|C|1284
5WDT|1|a|A|1285
5WDT|1|a|U|1286
5WDT|1|a|A|1287
5WDT|1|a|A|1288
5WDT|1|a|A|1289
5WDT|1|a|G|1290
5WDT|1|a|U|1291

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14