IL_5WDT_174

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGAGCCUGAAUCAGUGUGUGUG*UGCACAUGCUGUGAGCUCGAUG

Length

45 nucleotides

Bulged bases

5WDT|1|A|U|276, 5WDT|1|A|U|360

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|C|269
5WDT|1|A|A|270
5WDT|1|A|G|271
5WDT|1|A|A|272
5WDT|1|A|G|273
5WDT|1|A|C|274
5WDT|1|A|C|275
5WDT|1|A|U|276
5WDT|1|A|G|277
5WDT|1|A|A|278
5WDT|1|A|A|279
5WDT|1|A|U|280
5WDT|1|A|C|281
5WDT|1|A|A|282
5WDT|1|A|G|283
5WDT|1|A|U|284
5WDT|1|A|G|285
5WDT|1|A|U|286
5WDT|1|A|G|287
5WDT|1|A|U|288
5WDT|1|A|G|289
5WDT|1|A|U|290
5WDT|1|A|G|291
*
5WDT|1|A|U|349
5WDT|1|A|G|350
5WDT|1|A|C|351
5WDT|1|A|A|352
5WDT|1|A|C|353
5WDT|1|A|A|354
5WDT|1|A|U|355
5WDT|1|A|G|356
5WDT|1|A|C|357
5WDT|1|A|U|358
5WDT|1|A|G|359
5WDT|1|A|U|360
5WDT|1|A|G|361
5WDT|1|A|A|362
5WDT|1|A|G|363
5WDT|1|A|C|364
5WDT|1|A|U|365
5WDT|1|A|C|366
5WDT|1|A|G|367
5WDT|1|A|A|368
5WDT|1|A|U|369
5WDT|1|A|G|370

Current chains

Chain A

23S rRNA

Nearby chains