IL_5WE4_024
3D structure
- PDB id
- 5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu wt complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GA*UGC
- Length
- 5 nucleotides
- Bulged bases (A, C, G, U)
- 914G
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WE4_024 not in the Motif Atlas
- Homologous match to IL_5J7L_271
- Geometric discrepancy: 0.2439
- The information below is about IL_5J7L_271
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 42
Unit IDs
5WE4|1|A|G|862
5WE4|1|A|A|863
*
5WE4|1|A|U|913
5WE4|1|A|G|914
5WE4|1|A|C|915
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
Coloring options: