IL_5WE4_116
3D structure
- PDB id
- 5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu wt complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAU*AG
- Length
- 5 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WE4_116 not in the Motif Atlas
- Homologous match to IL_5J7L_004
- Geometric discrepancy: 0.1399
- The information below is about IL_5J7L_004
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_80097.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
5WE4|1|a|C|54
5WE4|1|a|A|55
5WE4|1|a|U|56
*
5WE4|1|a|A|356
5WE4|1|a|G|357
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
- Chain y
- Transfer RNA; tRNA
- Chain z
- Elongation factor Tu 2
Coloring options: