3D structure

PDB id
5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu wt complex with GppNHp
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGACC*GCAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_5WE4_197 not in the Motif Atlas
Homologous match to IL_5J7L_056
Geometric discrepancy: 0.191
The information below is about IL_5J7L_056
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_17948.2
Basepair signature
cWW-L-R-tSH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

5WE4|1|a|C|1259
5WE4|1|a|G|1260
5WE4|1|a|A|1261
5WE4|1|a|C|1262
5WE4|1|a|C|1263
*
5WE4|1|a|G|1272
5WE4|1|a|C|1273
5WE4|1|a|A|1274
5WE4|1|a|A|1275
5WE4|1|a|G|1276

Current chains

Chain a
16S rRNA

Nearby chains

Chain n
30S ribosomal protein S14
Chain s
30S ribosomal protein S19

Coloring options:


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