IL_5WE6_017

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE6_017 not in the Motif Atlas

Homologous match to IL_4WF9_024

Geometric discrepancy: 0.0866

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

5WE6|1|A|U|703
5WE6|1|A|G|704
5WE6|1|A|A|705
5WE6|1|A|A|706
5WE6|1|A|G|707
*
5WE6|1|A|U|724
5WE6|1|A|G|725
5WE6|1|A|G|726
5WE6|1|A|A|727
5WE6|1|A|G|728

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2