IL_5WE6_028

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGGG*UUACC

Length

9 nucleotides

Bulged bases

5WE6|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE6_028 not in the Motif Atlas

Geometric match to IL_4V88_429

Geometric discrepancy: 0.3089

The information below is about IL_4V88_429

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

5WE6|1|A|G|879
5WE6|1|A|G|880
5WE6|1|A|G|881
5WE6|1|A|G|882
*
5WE6|1|A|U|894
5WE6|1|A|U|895
5WE6|1|A|A|896
5WE6|1|A|C|897
5WE6|1|A|C|898

Current chains

Chain A

23S rRNA

Nearby chains