3D structure

PDB id
5WE6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC
Length
40 nucleotides
Bulged bases
5WE6|1|A|U|1061, 5WE6|1|A|C|1064, 5WE6|1|A|U|1065, 5WE6|1|A|U|1066, 5WE6|1|A|A|1070
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WE6|1|A|G|1055
5WE6|1|A|G|1056
5WE6|1|A|A|1057
5WE6|1|A|U|1058
5WE6|1|A|G|1059
5WE6|1|A|U|1060
5WE6|1|A|U|1061
5WE6|1|A|G|1062
5WE6|1|A|G|1063
5WE6|1|A|C|1064
5WE6|1|A|U|1065
5WE6|1|A|U|1066
5WE6|1|A|A|1067
5WE6|1|A|G|1068
5WE6|1|A|A|1069
5WE6|1|A|A|1070
5WE6|1|A|G|1071
5WE6|1|A|C|1072
5WE6|1|A|A|1073
5WE6|1|A|G|1074
5WE6|1|A|C|1075
5WE6|1|A|C|1076
5WE6|1|A|A|1077
5WE6|1|A|U|1078
5WE6|1|A|C|1079
5WE6|1|A|A|1080
5WE6|1|A|U|1081
5WE6|1|A|U|1082
5WE6|1|A|U|1083
5WE6|1|A|A|1084
5WE6|1|A|A|1085
5WE6|1|A|A|1086
5WE6|1|A|G|1087
5WE6|1|A|A|1088
5WE6|1|A|A|1089
5WE6|1|A|A|1090
*
5WE6|1|A|U|1101
5WE6|1|A|C|1102
5WE6|1|A|A|1103
5WE6|1|A|C|1104

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain 5
50S ribosomal protein L10
Chain I
50S ribosomal protein L11
Chain M
50S ribosomal protein L16
Chain y
Transfer RNA; tRNA

Coloring options:

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