IL_5WE6_212

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUG*UGAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE6_212 not in the Motif Atlas

Homologous match to IL_4WF9_124

Geometric discrepancy: 0.5709

The information below is about IL_4WF9_124

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_13404.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

10

Unit IDs

5WE6|1|A|A|2097
5WE6|1|A|U|2098
5WE6|1|A|U|2099
5WE6|1|A|G|2100
*
5WE6|1|A|U|2189
5WE6|1|A|G|2190
5WE6|1|A|A|2191
5WE6|1|A|U|2192

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9