IL_5WF0_029

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGG*UUACC

Length

9 nucleotides

Bulged bases

5WF0|1|A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WF0_029 not in the Motif Atlas

Geometric match to IL_4V88_429

Geometric discrepancy: 0.3307

The information below is about IL_4V88_429

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

5WF0|1|A|G|879
5WF0|1|A|G|880
5WF0|1|A|G|881
5WF0|1|A|G|882
*
5WF0|1|A|U|894
5WF0|1|A|U|895
5WF0|1|A|A|896
5WF0|1|A|C|897
5WF0|1|A|C|898

Current chains

Chain A

23S rRNA

Nearby chains