IL_5WF0_082

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

5WF0|1|A|U|2111, 5WF0|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WF0|1|A|U|2105
5WF0|1|A|U|2106
5WF0|1|A|G|2107
5WF0|1|A|A|2108
5WF0|1|A|U|2109
5WF0|1|A|G|2110
5WF0|1|A|U|2111
5WF0|1|A|G|2112
5WF0|1|A|U|2113
5WF0|1|A|A|2114
5WF0|1|A|G|2115
5WF0|1|A|G|2116
5WF0|1|A|A|2117
5WF0|1|A|U|2118
5WF0|1|A|A|2119
5WF0|1|A|G|2120
5WF0|1|A|G|2121
*
5WF0|1|A|C|2177
5WF0|1|A|C|2178
5WF0|1|A|C|2179
5WF0|1|A|U|2180
5WF0|1|A|U|2181
5WF0|1|A|U|2182
5WF0|1|A|A|2183
5WF0|1|A|A|2184

Current chains

Chain A

23S rRNA

Nearby chains

Chain w

Transfer RNA; tRNA