IL_5WF0_083

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGGGAGG*CCGACCUUGAAAUACCAC

Length

26 nucleotides

Bulged bases

5WF0|1|A|A|2171, 5WF0|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WF0|1|A|G|2121
5WF0|1|A|U|2122
5WF0|1|A|G|2123
5WF0|1|A|G|2124
5WF0|1|A|G|2125
5WF0|1|A|A|2126
5WF0|1|A|G|2127
5WF0|1|A|G|2128
*
5WF0|1|A|C|2160
5WF0|1|A|C|2161
5WF0|1|A|G|2162
5WF0|1|A|A|2163
5WF0|1|A|C|2164
5WF0|1|A|C|2165
5WF0|1|A|U|2166
5WF0|1|A|U|2167
5WF0|1|A|G|2168
5WF0|1|A|A|2169
5WF0|1|A|A|2170
5WF0|1|A|A|2171
5WF0|1|A|U|2172
5WF0|1|A|A|2173
5WF0|1|A|C|2174
5WF0|1|A|C|2175
5WF0|1|A|A|2176
5WF0|1|A|C|2177

Current chains

Chain A

23S rRNA

Nearby chains

Chain w

Transfer RNA; tRNA