3D structure

PDB id
5WF0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CCG(PSU)GCCAG*CGGUAAUACGG
Length
20 nucleotides
Bulged bases
5WF0|1|a|A|532, 5WF0|1|a|U|534
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WF0|1|a|C|513
5WF0|1|a|C|514
5WF0|1|a|G|515
5WF0|1|a|PSU|516
5WF0|1|a|G|517
5WF0|1|a|C|518
5WF0|1|a|C|519
5WF0|1|a|A|520
5WF0|1|a|G|521
*
5WF0|1|a|C|528
5WF0|1|a|G|529
5WF0|1|a|G|530
5WF0|1|a|U|531
5WF0|1|a|A|532
5WF0|1|a|A|533
5WF0|1|a|U|534
5WF0|1|a|A|535
5WF0|1|a|C|536
5WF0|1|a|G|537
5WF0|1|a|G|538

Current chains

Chain a
16S rRNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain d
30S ribosomal protein S4
Chain l
30S ribosomal protein S12
Chain x
mRNA
Chain y
Transfer RNA; tRNA

Coloring options:

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