IL_5WF0_175

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AACUC*GUUAU

Length

10 nucleotides

Bulged bases

5WF0|1|A|C|846, 5WF0|1|A|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WF0_175 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.1945

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

5WF0|1|A|A|844
5WF0|1|A|A|845
5WF0|1|A|C|846
5WF0|1|A|U|847
5WF0|1|A|C|848
*
5WF0|1|A|G|930
5WF0|1|A|U|931
5WF0|1|A|U|932
5WF0|1|A|A|933
5WF0|1|A|U|934

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L30