Loop IL_5WF0

3D structure

PDB id: 5WF0 (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Loop

Sequence: GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC
Length: 40 nucleotides
Bulged bases: 5WF0|1|A|G|1059, 5WF0|1|A|U|1061, 5WF0|1|A|C|1064, 5WF0|1|A|U|1065, 5WF0|1|A|U|1066, 5WF0|1|A|A|1070, 5WF0|1|A|U|1078
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5WF0|1|A|G|1055
5WF0|1|A|G|1056
5WF0|1|A|A|1057
5WF0|1|A|U|1058
5WF0|1|A|G|1059
5WF0|1|A|U|1060
5WF0|1|A|U|1061
5WF0|1|A|G|1062
5WF0|1|A|G|1063
5WF0|1|A|C|1064
5WF0|1|A|U|1065
5WF0|1|A|U|1066
5WF0|1|A|A|1067
5WF0|1|A|G|1068
5WF0|1|A|A|1069
5WF0|1|A|A|1070
5WF0|1|A|G|1071
5WF0|1|A|C|1072
5WF0|1|A|A|1073
5WF0|1|A|G|1074
5WF0|1|A|C|1075
5WF0|1|A|C|1076
5WF0|1|A|A|1077
5WF0|1|A|U|1078
5WF0|1|A|C|1079
5WF0|1|A|A|1080
5WF0|1|A|U|1081
5WF0|1|A|U|1082
5WF0|1|A|U|1083
5WF0|1|A|A|1084
5WF0|1|A|A|1085
5WF0|1|A|A|1086
5WF0|1|A|G|1087
5WF0|1|A|A|1088
5WF0|1|A|A|1089
5WF0|1|A|A|1090
*
5WF0|1|A|U|1101
5WF0|1|A|C|1102
5WF0|1|A|A|1103
5WF0|1|A|C|1104

Current chains

Chain A: 23S rRNA

Nearby chains

Chain 4: 50S ribosomal protein L36 1
Chain 5: 50S ribosomal protein L10
Chain I: 50S ribosomal protein L11
Chain M: 50S ribosomal protein L16
Chain y: Transfer RNA; tRNA

IL_5WF0_176