Loop IL_5WFK

3D structure

PDB id: 5WFK (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

Loop

Sequence: UUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUG*CAUGGAGCCGACCUUGAAAUACCACCCUUUAA
Length: 66 nucleotides
Bulged bases: 5WFK|1|A|U|2111, 5WFK|1|A|U|2118, 5WFK|1|A|U|2132, 5WFK|1|A|U|2172
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5WFK|1|A|U|2105
5WFK|1|A|U|2106
5WFK|1|A|G|2107
5WFK|1|A|A|2108
5WFK|1|A|U|2109
5WFK|1|A|G|2110
5WFK|1|A|U|2111
5WFK|1|A|G|2112
5WFK|1|A|U|2113
5WFK|1|A|A|2114
5WFK|1|A|G|2115
5WFK|1|A|G|2116
5WFK|1|A|A|2117
5WFK|1|A|U|2118
5WFK|1|A|A|2119
5WFK|1|A|G|2120
5WFK|1|A|G|2121
5WFK|1|A|U|2122
5WFK|1|A|G|2123
5WFK|1|A|G|2124
5WFK|1|A|G|2125
5WFK|1|A|A|2126
5WFK|1|A|G|2127
5WFK|1|A|G|2128
5WFK|1|A|C|2129
5WFK|1|A|U|2130
5WFK|1|A|U|2131
5WFK|1|A|U|2132
5WFK|1|A|G|2133
5WFK|1|A|A|2134
5WFK|1|A|A|2135
5WFK|1|A|G|2136
5WFK|1|A|U|2137
5WFK|1|A|G|2138
*
5WFK|1|A|C|2153
5WFK|1|A|A|2154
5WFK|1|A|U|2155
5WFK|1|A|G|2156
5WFK|1|A|G|2157
5WFK|1|A|A|2158
5WFK|1|A|G|2159
5WFK|1|A|C|2160
5WFK|1|A|C|2161
5WFK|1|A|G|2162
5WFK|1|A|A|2163
5WFK|1|A|C|2164
5WFK|1|A|C|2165
5WFK|1|A|U|2166
5WFK|1|A|U|2167
5WFK|1|A|G|2168
5WFK|1|A|A|2169
5WFK|1|A|A|2170
5WFK|1|A|A|2171
5WFK|1|A|U|2172
5WFK|1|A|A|2173
5WFK|1|A|C|2174
5WFK|1|A|C|2175
5WFK|1|A|A|2176
5WFK|1|A|C|2177
5WFK|1|A|C|2178
5WFK|1|A|C|2179
5WFK|1|A|U|2180
5WFK|1|A|U|2181
5WFK|1|A|U|2182
5WFK|1|A|A|2183
5WFK|1|A|A|2184

Current chains

Chain A: 23S rRNA

Nearby chains

Chain w: Transfer RNA; tRNA

IL_5WFK_179