IL_5WFK_196

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUACAAAG*CAUAAAGUG

Length

18 nucleotides

Bulged bases

5WFK|1|a|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFK|1|a|C|1245
5WFK|1|a|A|1246
5WFK|1|a|U|1247
5WFK|1|a|A|1248
5WFK|1|a|C|1249
5WFK|1|a|A|1250
5WFK|1|a|A|1251
5WFK|1|a|A|1252
5WFK|1|a|G|1253
*
5WFK|1|a|C|1284
5WFK|1|a|A|1285
5WFK|1|a|U|1286
5WFK|1|a|A|1287
5WFK|1|a|A|1288
5WFK|1|a|A|1289
5WFK|1|a|G|1290
5WFK|1|a|U|1291
5WFK|1|a|G|1292

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain m

30S ribosomal protein S13

Chain n

30S ribosomal protein S14