3D structure

PDB id
5WFS (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA
Length
34 nucleotides
Bulged bases
5WFS|1|A|A|1127, 5WFS|1|A|U|1130
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WFS|1|A|U|1018
5WFS|1|A|U|1019
5WFS|1|A|A|1020
5WFS|1|A|A|1021
5WFS|1|A|G|1022
5WFS|1|A|U|1023
5WFS|1|A|G|1024
5WFS|1|A|G|1025
5WFS|1|A|G|1026
5WFS|1|A|A|1027
5WFS|1|A|A|1028
5WFS|1|A|A|1029
5WFS|1|A|C|1030
*
5WFS|1|A|G|1124
5WFS|1|A|G|1125
5WFS|1|A|A|1126
5WFS|1|A|A|1127
5WFS|1|A|G|1128
5WFS|1|A|A|1129
5WFS|1|A|U|1130
5WFS|1|A|G|1131
5WFS|1|A|U|1132
5WFS|1|A|A|1133
5WFS|1|A|A|1134
5WFS|1|A|C|1135
5WFS|1|A|G|1136
5WFS|1|A|G|1137
5WFS|1|A|G|1138
5WFS|1|A|G|1139
5WFS|1|A|C|1140
5WFS|1|A|U|1141
5WFS|1|A|A|1142
5WFS|1|A|A|1143
5WFS|1|A|A|1144

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36 1
Chain B
5S ribosomal RNA; 5S rRNA
Chain D
50S ribosomal protein L3
Chain G
50S ribosomal protein L6
Chain J
50S ribosomal protein L13
Chain M
50S ribosomal protein L16

Coloring options:

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