3D structure

PDB id
5WFS (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC
Length
36 nucleotides
Bulged bases
5WFS|1|A|U|1061, 5WFS|1|A|U|1066
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WFS|1|A|G|1055
5WFS|1|A|G|1056
5WFS|1|A|A|1057
5WFS|1|A|U|1058
5WFS|1|A|G|1059
5WFS|1|A|U|1060
5WFS|1|A|U|1061
5WFS|1|A|G|1062
5WFS|1|A|G|1063
5WFS|1|A|C|1064
5WFS|1|A|U|1065
5WFS|1|A|U|1066
5WFS|1|A|A|1067
5WFS|1|A|G|1068
5WFS|1|A|A|1069
5WFS|1|A|A|1070
5WFS|1|A|G|1071
5WFS|1|A|C|1072
5WFS|1|A|A|1073
5WFS|1|A|G|1074
5WFS|1|A|C|1075
5WFS|1|A|C|1076
5WFS|1|A|A|1077
5WFS|1|A|U|1078
5WFS|1|A|C|1079
5WFS|1|A|A|1080
5WFS|1|A|U|1081
5WFS|1|A|U|1082
5WFS|1|A|U|1083
5WFS|1|A|A|1084
5WFS|1|A|A|1085
5WFS|1|A|A|1086
5WFS|1|A|G|1087
*
5WFS|1|A|C|1102
5WFS|1|A|A|1103
5WFS|1|A|C|1104

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36 1
Chain 5
50S ribosomal protein L10
Chain I
50S ribosomal protein L11
Chain M
50S ribosomal protein L16
Chain y
Transfer RNA; tRNA

Coloring options:

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