IL_5WFS_075

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

5WFS|1|A|C|2055, 5WFS|1|A|U|2613, 5WFS|1|A|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WFS_075 not in the Motif Atlas

Homologous match to IL_4WF9_079

Geometric discrepancy: 0.1018

The information below is about IL_4WF9_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

5WFS|1|A|A|2054
5WFS|1|A|C|2055
5WFS|1|A|G|2056
*
5WFS|1|A|C|2612
5WFS|1|A|U|2613
5WFS|1|A|A|2614
5WFS|1|A|U|2615

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22