Loop IL_5WFS

3D structure

PDB id: 5WFS (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å

Loop

Sequence: UGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACCACCCUUUA
Length: 62 nucleotides
Bulged bases: 5WFS|1|A|U|2111, 5WFS|1|A|U|2118, 5WFS|1|A|U|2132, 5WFS|1|A|U|2172
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5WFS|1|A|U|2106
5WFS|1|A|G|2107
5WFS|1|A|A|2108
5WFS|1|A|U|2109
5WFS|1|A|G|2110
5WFS|1|A|U|2111
5WFS|1|A|G|2112
5WFS|1|A|U|2113
5WFS|1|A|A|2114
5WFS|1|A|G|2115
5WFS|1|A|G|2116
5WFS|1|A|A|2117
5WFS|1|A|U|2118
5WFS|1|A|A|2119
5WFS|1|A|G|2120
5WFS|1|A|G|2121
5WFS|1|A|U|2122
5WFS|1|A|G|2123
5WFS|1|A|G|2124
5WFS|1|A|G|2125
5WFS|1|A|A|2126
5WFS|1|A|G|2127
5WFS|1|A|G|2128
5WFS|1|A|C|2129
5WFS|1|A|U|2130
5WFS|1|A|U|2131
5WFS|1|A|U|2132
5WFS|1|A|G|2133
5WFS|1|A|A|2134
5WFS|1|A|A|2135
5WFS|1|A|G|2136
5WFS|1|A|U|2137
*
5WFS|1|A|A|2154
5WFS|1|A|U|2155
5WFS|1|A|G|2156
5WFS|1|A|G|2157
5WFS|1|A|A|2158
5WFS|1|A|G|2159
5WFS|1|A|C|2160
5WFS|1|A|C|2161
5WFS|1|A|G|2162
5WFS|1|A|A|2163
5WFS|1|A|C|2164
5WFS|1|A|C|2165
5WFS|1|A|U|2166
5WFS|1|A|U|2167
5WFS|1|A|G|2168
5WFS|1|A|A|2169
5WFS|1|A|A|2170
5WFS|1|A|A|2171
5WFS|1|A|U|2172
5WFS|1|A|A|2173
5WFS|1|A|C|2174
5WFS|1|A|C|2175
5WFS|1|A|A|2176
5WFS|1|A|C|2177
5WFS|1|A|C|2178
5WFS|1|A|C|2179
5WFS|1|A|U|2180
5WFS|1|A|U|2181
5WFS|1|A|U|2182
5WFS|1|A|A|2183

Current chains

Chain A: 23S rRNA

Nearby chains

Chain k: 30S ribosomal protein S11
Chain w: Transfer RNA; tRNA

IL_5WFS_204